Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFPKKVLGEEWEEGRKFNKLYQKDKQRKLIKRQGILRESQNGIQVYKEDPEIVEIAKPIGKWTQMVMQDGGLMQRLAQLMKRESGRKGFWELFVEAQASTHGKHKGKGR
1Q2Z Chain:A ((68-92))
----------------------------------------------------------------------NFLKALQEKVE-IKQLNHFWEIVVQDGITLITKEEASGS
General information:
TITO was launched using:
RESULT:
Template:
1Q2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5480 for 112 contacts (-48.9/contact) +
2D Compatibility (PS) -2973 + (NN) -2606 + (LL) 5284
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -9225.0 ( -82.37 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_1Q2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q2Z-query.scw
PDB file :
Tito_Scwrl_1Q2Z.pdb
: