Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEHLNLFSLENSDYIYADYNATFPVSDSVKESILEVLSKQVLNPSSLHRKGQEARRILQDARDNIRSAIGVPSNKEIVFTSGATEANSLVM------------KGIAGFQH------VISAVEHPSIL--------NSACNPHIIPVNQGGIVDLLALERILSELKGNRVIVSVMMANNETGVVQPVKEIAE---------IAHKFETIY-HTDAAQSVGKIKVNMEDLGMDLLTLSAHKFGGIAGSGVLI--FNKDLVIEPIIVGGGQEKGLRGGTENIVAIAGLSAALQSIS-NLLSKMDEIKELRDQLEYELLNLASGIKIFGKNS-----KRLPNTSLIYMPGVKSDVQLMNFDLNNIAVSNGSACSSGKV-EPSHVLLAMGATREQAECSIRVSIGPQTKPRDIRKIVDCWYNIYEKNILDMRK |
| 3GZC Chain:A ((27-426)) | ----------------VYMDYNATTPLEPEVIQAMTKAMWEAWGNPSSPYSAGRKAKDIINAARESLAKMIGG-KPQDIIFTSGGTESNNLVIHSVVKHFHANQT--------GAKPHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSK--VSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQRIKALNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFYGPRIGALYIRGLGEFTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLE-ERLEAEFGQKRIHLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRVLMASVGAACHSDHGDQPSPVLLSYGVPFDVARNALRLSVGRSTTRAEVDLVVQDLKQAVAQLEDQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147642 for 2942 contacts (-50.2/contact) +
2D Compatibility (PS) -37900 + (NN) -16663 + (LL) 1092
1D Compatibility (HY) -21200 + (ID) 6250
Total energy: -228563.0 ( -77.69 by residue)
QMean score : 0.441
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