Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAACRGYCRKIYLAIDNVLYAI--NETMVMWKKELKS-----------LVKGNPTIFNDKLAISTLDDCLYMLDMRMIVQSGPIISPVIMIVTK
1KV9 Chain:A ((61-136))
--TPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYS
General information:
TITO was launched using:
RESULT:
Template:
1KV9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33381 for 391 contacts (-85.4/contact) +
2D Compatibility (PS) -6605 + (NN) 3404 + (LL) 36
1D Compatibility (HY) -800 + (ID) 550
Total energy: -37896.0 ( -96.92 by residue)
QMean score : 0.102
(partial model without unconserved sides chains):
PDB file :
Tito_1KV9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KV9-query.scw
PDB file :
Tito_Scwrl_1KV9.pdb
: