Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKLSYILIVIFISFPILLAASENNEKTQIKDIKCIGNERVGDQTIKFYIKLEPDSYVNDDDIDSIIKSLYKTKLFASVHAYIDNEKKLVIKVQENPLINKVILKGNKQFKSKELLNNVIQS--KPLTIFTETKLQSDLVNLVTLYRHNGKIGVKVEYELDKLDGNRVNLIFKVKEGKTSRVKSVRFIGNKNFSENELERAIKVQSNDIFNKLFRAIFKGGNHYSPQYLLTNEELLDRFYSSKGYINNSIQPIAEIDNNNQIELTFLIDEGQQYLFGSNKVNVEAEIQDPDLKEKVLELITKEDNKVFDRVKVSNAVEKINKYLNEIGYIFAKVNPEYTQHGNVVDVTYRVLPGKKIYINQITIDGNDRTLDKVIRSKLSVAEGDAYNTSEVQKSRRRLIGSDFFETVKINSYAINDNAVNLDLNVKEKNTTSLYLGGGVSFPGGAFIKTDFKDRNLFGTGKELSFALEKSQYVFSTNVEVVENNFNDSDTSLGVDVFYERQDKPNTTFDSCDWGGIAQLLHKIIENLTNSIRYSYKYNHIHMDNKGGKDEDISEIIRSQQGEYQISSVGYTLAYNKLDNLYAPREGYLLRLSQDISGLGGNMNFLKSEFLSFYTHPILSKIDDDIILRFKMAAGYIFSYTDKELNIGQRFFKGGNEIRGFDLSGIGPRAKDKNKSSLGGKTYFNLTQQVDFPLPKLYDYVGIKGSLFVDYATLFGLDIKKEYEGKYHDSKLVRVSPGFGFSMPSPFGGRFRLDFGFPLAKEPYDIIPSSNIKFSIEVGI |
2V9H Chain:A ((26-172)) | -----------------------------VKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGD-TLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68245 for 994 contacts (-68.7/contact) +
2D Compatibility (PS) -15751 + (NN) -4341 + (LL) 35280
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -62757.0 ( -63.14 by residue)
QMean score : 0.578
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