Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVVEIVIRNSTYKISCESGKKDHLLHLANSFNKLVSSISHK--TGGKGSDTLNFLLAALILEDKVLELTKKLDEINQKRENYKNEKRTEYTEVLDRVNKIIECIKD
3ZUA Chain:A ((30-68))
--------------------------------------IKHRFDTDGTGLGLTSWLLAAKSLELKVKQVKKTIDRLNFISLPALVWREDGRHFILTKVSKEANRYLI
General information:
TITO was launched using:
RESULT:
Template:
3ZUA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4686 for 152 contacts (-30.8/contact) +
2D Compatibility (PS) -4050 + (NN) -1064 + (LL) 2884
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -9716.0 ( -63.92 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_3ZUA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZUA-query.scw
PDB file :
Tito_Scwrl_3ZUA.pdb
: