Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIKVQRKKMELGAEVADQFLSEMNQTKIKIQDAKEATETARNVSKSFAQNAKDKNTELHDKVVNFTKKAETASENAEDFAREAFLSKQSTKTLKQETKEL
1CF7 Chain:A ((6-37))
-----SRHEKSLG-LLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWK----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1CF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4598 for 129 contacts (35.6/contact) +
2D Compatibility (PS) -3148 + (NN) -897 + (LL) 2536
1D Compatibility (HY) -1600 + (ID) 450
Total energy: 1039.0 ( 8.05 by residue)
QMean score : 0.250
(partial model without unconserved sides chains):
PDB file :
Tito_1CF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CF7-query.scw
PDB file :
Tito_Scwrl_1CF7.pdb
: