Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFDCLIIFIIVVCIIISITRGFIKELCALMFLFLSAFLTANHYDFFTINYSKYFNSKAMQNIFSTISVFIIFNLIFMIVNNWLMYILTPIRLGLIDRVTGTFVGALRGVLLSYVLFFAMHLYCYTVHDKKEEQSKIEAEDILPNWIINSYSYQALFATVEDIVDVYVPESLILKIKEIGEGMANQEKLKGDKKEE |
2JWA Chain:A ((55-61)) | ---------------------------------------------------------------------------------------------------ISAVVGI------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113 for 18 contacts (-6.3/contact) +
2D Compatibility (PS) -748 + (NN) -100 + (LL) 18228
1D Compatibility (HY) -800 + (ID) 100
Total energy: 16367.0 ( 909.28 by residue)
QMean score : -0.263
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