Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEELLNEIPLLEDKAVFEIESASSLQDLEKVRLSYLGRKGVIKAYFDDLRKVEDTEKKRDLGAIINVLRNKLDQLIMNKESILKAEEVNFKLQNEAIDITLPVRPEKIGRAHPLSKVMNEVKLIFAHMGFRAVNGPDIEDEFHVFDALNTPSHHPAREEQDTFYLKNKI----------NDKRMMLRTHTSSMQIRAMKKAKTFPIKIVAAGRVYR-NDFDATHTPMFHQMEGLYVNENVNMGQLKFTIHHFLNKFFGDKELKIRFRNSFFPFTEPSAEVDISYKE-SKWIEVLGCGIVHPNVFQNV-------GID--HTKYSGFAFGIGIERLAMLKYQISDLRNFYDNKISWLSHYGFHFSSLR |
| 1EIY Chain:A ((6-346)) | ----------------LAAIQNARDLEELKALKARYLGKKGLLTQEMKGLSAL-PLEERRKRGQELNAIKAALEAALEAREKALEEAALKEALERERVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYM-VAHTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALFGPDS-KVRFQPVYFPFVEPGAQFAVWWPEGGKWLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQFKGVL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117036 for 2275 contacts (-51.4/contact) +
2D Compatibility (PS) -33217 + (NN) -6332 + (LL) 1844
1D Compatibility (HY) -29200 + (ID) 6500
Total energy: -190441.0 ( -83.71 by residue)
QMean score : 0.448
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