Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSKKSEGRIYFAIEVDIFRYIATYYMLCEQKGSQTEEGVVHNDKYKEQRKKLYGKDEEQKGNRK
3GD0 Chain:A ((112-122))
-----FSGRIYFSYGR-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GD0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -200 for 21 contacts (-9.5/contact) +
2D Compatibility (PS) -1154 + (NN) -552 + (LL) 3456
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 100.0 ( 4.76 by residue)
QMean score : -0.071
(partial model without unconserved sides chains):
PDB file :
Tito_3GD0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GD0-query.scw
PDB file :
Tito_Scwrl_3GD0.pdb
: