Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLALPALFLWLLNWTLVKEIWRFNDLMQEAPEEERQLIIYR-------LVDTLPFITQ--TTYDLSAVASVNLSVNKLIEKYGENLSKDGFYTQLNRENTTNIEGYIKQSNEFKAEEKSHALKCLGFINRIEDKFQDNCSKLTLKQADILY
4WSG Chain:A ((13-68))
-------------------------------PTNVRQLMYYTEASSAFIVVKLMPTIDSPISGCNITSISSYNATVTKLLQPIGENLETIRNQLIPTRRRFAGVVIGLAALGVATAAQVTAAVALVKANENAAAILNLKNAIQKTNAAVADV
General information:
TITO was launched using:
RESULT:
Template:
4WSG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3680 for 154 contacts (-23.9/contact) +
2D Compatibility (PS) -4989 + (NN) -338 + (LL) 3684
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -12173.0 ( -79.05 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_4WSG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WSG-query.scw
PDB file :
Tito_Scwrl_4WSG.pdb
: