Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPARSAEDVITSLIEFVNKRKVTITREEMLKIAQLVRIKLSNDEIEHYSKELTMLDWIHDILLRVNTKDVSPIRYGSIDKDIHVRDDVVNFQSMKEEILSNTKS-EHGYFVVPKVIND
4WJ3 Chain:C ((9-102))
---------------------MALERSDVEKIAHLARLGLSEADLPRTTETLNNILGLIDQMQAVDTSGVEPLAH-PLEATQRLRPDAVTETDHRDAYQTIAPAVEEGLYLVPKVIES
General information:
TITO was launched using:
RESULT:
Template:
4WJ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7914 for 356 contacts (-22.2/contact) +
2D Compatibility (PS) -10220 + (NN) -3970 + (LL) 1660
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -26444.0 ( -74.28 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_4WJ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WJ3-query.scw
PDB file :
Tito_Scwrl_4WJ3.pdb
: