Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELNKIAASILLSGLIIMIVSNVVDMLYNPEKYKIEHQTMVATGSNEPQKKIEQVALDIGALMQSASLEKGKSI-AKKCIACHSFDKGGANKVGPNLWNIVGNKKAHLGDSFNYSKAMLEKGGKWGYEELFAFLKSPKDYIKGTRMAFAGISNPQEIADLVSYLRQLSDNQVALPK |
3NBS Chain:A ((1-103)) | -----------------------------------------------------------------GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQ-APGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -541 for 544 contacts (-1.0/contact) +
2D Compatibility (PS) -10856 + (NN) -2943 + (LL) 6416
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -16524.0 ( -30.38 by residue)
QMean score : 0.439
|
|
|