Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLGIEKRGITNALWKLQEADQREVLTLTQRFELPEILARTLAIRGVNIENAGNFLYPLIRSLLPDPFHLLDMDKAVFRIIQAINNDENIAIFGDYDVDGATSSALISRYLRAIGIHSIIYIPDRVDEGYGLNSNALLQL--KKKGIDLCISVDCGTLAYQPIEDAKGFGLDVIVIDHHLGTEKLPSAIAVVNPNRLDESSPYNSLAAVGVSFLLTVALNKSLREQDFFAGKKEPDLFDLLDLVALGTVCDVMQITGLNRAFVSQGLKVMSARKNVGLRVLFDALGILERPNVSRLSFNIGPCINAGGRIGEALLGARLLSTDDKKEADSIALKLIDLNNARKMMENEALLEAIIQVEKSTQSGANFIMVSGNWHQGVIGIIASRLKEKFHLPTIVISLNNRIGKASCRSIPGVDIGAAVLSAKCMNLIIEGGGHSMAAGFLINEDKMSDLHDFLTERFAYSTNDKALKVDGIVTAKAINLSLWNQLQRLEPFGVGNPEPRFIIQGAKIRKPEIVGVDHIKCFIVDDDVMVRAIAFRSANTHLGSAIMEGNIEAILGKISMNYWNGNEFVQFLIEDVLTIS |
2HTM Chain:A ((106-220)) | --------------------------------------------------------------LLPDPLETL---KAAERLIE-----EDFLVLPYMGPD-----LVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRLAVEAGRKAYLAGPMRP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68142 for 826 contacts (-82.5/contact) +
2D Compatibility (PS) -12665 + (NN) -9236 + (LL) 31056
1D Compatibility (HY) -6400 + (ID) 1550
Total energy: -66937.0 ( -81.04 by residue)
QMean score : 0.392
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