Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYKISKLILSALKANKYTKVIVLFSSIFVILFSVIYCNYSLRDNFLSSYRDSSVSLKSVLENSIIKKYHYLLIEKHHIKYKSFDYINQLVKLRAELLQSVGEVKDLGLILYDQNSRIIFSHFNTQDHDYEQLLTNDEIDKLLNNQEIFYTIGHTLISIFPIFHENDTKPSFFLKIIQNHDNFYVMVYSLFLTFLGLLLIILILVMLYLHFSNTQMLVKQHKTNIELQQMKEALEQENTNKLKFFASVTHELRTPLNAIIGFAELIKNETLGSMDNYQYKE-YVDDIYNAGTHLLALINDVLDFSKAESSSLTVEKVKFNLNKIIDSCLNMLSPKLKETGISLEKEIPNRQLLVIADPKRMKQVIINLLSNSIKFTPKDGLIRMVIKENIEKNLLTIEFHDNGIGIMQQDIYKVMSVFGQADSGYRNEGTGIGLPLSKKLVELMGGTFNIKSEAKLGTTITLNFFYEEQTCEDLIDF |
3D36 Chain:A ((19-220)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASISHEIRNPLTAARGFIQLIEEQPLAADKRRQYARIAIEELDRAE----AIITDYLTFAKPAPETPEKLNVKLEIERVID----ILRPLANMSCVDIQATLA--PFSVIGEREKFRQCLLNVMKNAIEAMPNGGTLQVYV--SIDNGRVLIRIADTGVGMTKEQLERLGEPYFTTKG---VKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYLPLAS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81230 for 1445 contacts (-56.2/contact) +
2D Compatibility (PS) -20798 + (NN) 1013 + (LL) 23048
1D Compatibility (HY) -15600 + (ID) 2750
Total energy: -96317.0 ( -66.66 by residue)
QMean score : 0.372
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