Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRKIRNLKGAYKIREFLEEKLKNIGDNIAASSVDDEDVGATTSSKKKKPATGKPTEQVILQIDDKLELGSKPDLRDSPRLS
2WIV Chain:A ((189-222))
------------RVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTA
General information:
TITO was launched using:
RESULT:
Template:
2WIV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5249 for 148 contacts (35.5/contact) +
2D Compatibility (PS) -3877 + (NN) -1637 + (LL) 1104
1D Compatibility (HY) -800 + (ID) 650
Total energy: -611.0 ( -4.13 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2WIV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WIV-query.scw
PDB file :
Tito_Scwrl_2WIV.pdb
: