Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIPEKMINLCYNSADSVSVEYSDVIVVKNLDPEQLEQYKSSSKLEFTLKFQNGKVEYKNSKVTLTIPEQLKNCKANGKSLLGDINEHFKDTDNEVVECLVDKIADGLKSFI----INPEDLNVDGSSIINKDDDAPVQILDSTEYGGTTEEQLLIQGIVNNVVGTLAGIVEVPIGMATDWVWPQDQK |
3N55 Chain:A ((32-114)) | ---------------------------------------------------------------------------ANGQVCQGDITVTQAGT---ITYLLNDQTLKGLK-FVGVGFVTPFDGIIDAVTI--SSDGMLVQLVDLDKTPGTTKFQFVLSNTANTLLVLSPD------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N55.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1848 for 387 contacts (4.8/contact) +
2D Compatibility (PS) -8352 + (NN) -825 + (LL) 6716
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -5913.0 ( -15.28 by residue)
QMean score : 0.206
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