Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHSNKAADRNSHESRKSYMVNLFGDQWKKANQIYQQYL-DNALLQNITLNQGVEKMLQTLKSHNIYLAIVSNKKNINLREEVTYFKLDSYFKRVVGSC--DTAEDKPSAIPLLFALEESRLPIDRENVFFVGDSITDILCAQ--NANCLPIIYG----QPISGYEDLLCFQHFDKLTDFIMKYLKDR
3SD7 Chain:A ((89-240))
--------------------------KAKEAVEKYREYFADKGIFEN-KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVK---DKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDILL------
General information:
TITO was launched using:
RESULT:
Template:
3SD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70188 for 984 contacts (-71.3/contact) +
2D Compatibility (PS) -15354 + (NN) -2874 + (LL) 1832
1D Compatibility (HY) -13200 + (ID) 1800
Total energy: -101584.0 ( -103.24 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_3SD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SD7-query.scw
PDB file :
Tito_Scwrl_3SD7.pdb
: