Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSGSQHLFDIIILLSAAVFIVIAFWKMNISPVLGYFVAGALIGSHGFNLIHSAKAMDNFAEFGVVFLLFIIGLELTFERLIAMRIHVFGFGSLQVIVTMVAIWCIALAFGVNTNMAAVIGGGLALSSTAIVLQVLQEKGSQASQVGRLSIAVLLMQDFAVVPLIVLVPLLTGNSENSLISSLTGSLLQAAIALVMIFITGRLLLRPLFSIIARMESNEVFISTTLLIILGAAFITEQFRLSMALGAFVAGLLVAETEHRHSVEHAVLPFKDLLLGLFFMTVGMSINIDLLLNKLPLITLLSIILIVLKTSIIYMLCRFFGFKRAPAIQAGLLLAQGGEFAFILFRLADELNVLPSEIAQVLMMVTTVTMAFTPLLSGLGDWIVNSFSTEKVILDDEAVETDTQDLYNHVIVAGFGRVGYMVTKMLTAEHLSYVVVDIQSKIVKEGKSDSFPIYLGDATRYEILKSVGIGRAQALVISIKNEVTIKKIVSLVATNF-PHVNIIIRLPDLSNAEVYKDLGASKIIPETSEMGLQLGGAALSLSGISESGVASLKSKFRKGNYSMIKDISSDMDE |
| 4GX5 Chain:A ((351-464)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPV---CNDHVVVY-GDATVGQTLRQAGIDRASGIIVTTNDDST-NIFLTLACRHLHSHIRIVARANGEENVDQLYAAGADFVVSNASVGANILGNLLEHK-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -87286 for 860 contacts (-101.5/contact) +
2D Compatibility (PS) -12241 + (NN) -4696 + (LL) 40404
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: -71219.0 ( -82.81 by residue)
QMean score : 0.481
|
|
|