Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSLYLRSHSLSKLNSSLFAVNNNQNVEPRSDISTGLFKLKNSVYPPTFTMGSHLSNNKILPLYCQNHGHDNMQYYNIIIWITTMLKA
3DXE Chain:B ((676-687))
---------------------------------------------------------------KMQQNGYENPTY-------------
General information:
TITO was launched using:
RESULT:
Template:
3DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -996 for 33 contacts (-30.2/contact) +
2D Compatibility (PS) -1288 + (NN) -518 + (LL) 4532
1D Compatibility (HY) 0 + (ID) 200
Total energy: 1530.0 ( 46.36 by residue)
QMean score : -0.141
(partial model without unconserved sides chains):
PDB file :
Tito_3DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DXE-query.scw
PDB file :
Tito_Scwrl_3DXE.pdb
: