Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNGTVNKVILVGNLGRNPEIRTMQNGKEMANFSIATSEGWTDKFSGVRSEKTEWHNIVIFSEGLVKVVKDFVRKGSKVYIEGSLKTRKW--TDQNGSERYTTEVVLQNFNGTLTLLDSRNNAASSDYKSNEYKQDETGQKDQYENFDSEVKEELIDDEIPF
3ULP Chain:A ((77-194))
MNEKSLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTDWHRIVVYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHT----SQPKQITEIILSYNKGDLIFLD--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ULP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51611 for 688 contacts (-75.0/contact) +
2D Compatibility (PS) -12121 + (NN) -2023 + (LL) 1888
1D Compatibility (HY) -12400 + (ID) 2150
Total energy: -78417.0 ( -113.98 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3ULP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ULP-query.scw
PDB file :
Tito_Scwrl_3ULP.pdb
: