Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDGACSGNPGTGGWAAIILFQDYRKDVYGREENTTSNKMELTAVINGLKALKFSCNINLYTDSLYVKSGITEWVSKWKVNGWKTSSKRSVKNIELWKELDNIASQHKINWKWVKAHNGDKHNEEANNLARKAIIDA
1WSI Chain:A ((10-144))
-DGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKG-AGHPENERCNELARAAAMNP
General information:
TITO was launched using:
RESULT:
Template:
1WSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18261 for 1007 contacts (-18.1/contact) +
2D Compatibility (PS) -14291 + (NN) -5536 + (LL) 252
1D Compatibility (HY) -8800 + (ID) 3150
Total energy: -49786.0 ( -49.44 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_1WSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WSI-query.scw
PDB file :
Tito_Scwrl_1WSI.pdb
: