Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTINQLVRKGRLKLSCKKKVPALGKSNPQRRGVCTKVYTTTPRKPNSALRKVARVRISGYGEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGALDLRGVQNRKKARSKYGVKKSS
4GKJ Chain:L ((1-120))-PTINQLVRKGREKVRKKSKVPAL-KGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK


General information:
TITO was launched using:
RESULT:

Template: 4GKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26867 for 797 contacts (-33.7/contact) +
2D Compatibility (PS) -12248 + (NN) -51 + (LL) 36
1D Compatibility (HY) -9600 + (ID) 4650
Total energy: -53380.0 ( -66.98 by residue)
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_4GKJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GKJ-query.scw
PDB file : Tito_Scwrl_4GKJ.pdb: