Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNEIRERFIKFFVRNNHKQVFSSPLIPEHDPTLMFTNAGMVQFKNIFTGIQKTDIKRAVSSQKCLRVGGKHNDLENVGYTTRHHTFFEMLGNFSFGDYFKETAIEFAWKFITEELSLDKNRLSITIYHTDDKSYEIWRKVSGFSNDKIIRIATDDNFWSMGNIGPCGPCSEIFYDYAKPNLQNDDRIVEIWNLVFMEFNKDEEGNLQKLPKKCIDTGMGLERVAAVMQNVYDNYDIDLFSALISKSQEYCG-----NVENKAAHKIIADHLRAAAFLIAEGVLPGNEGRNYILRRLIRRAVRYIHQLGYNDPLLHRIFPVLIDSTSSAYMGGVYPELIRAKSLIETTLKSEEENFKDTLIKGINLLKKFTTD-LKPG-DTLSGESAFKLYDTYGFPLDITLDILKERKINFDQKGFDNAMEEQKERARAKWTGSGEKSIEQIWFNLIDKFGKTE-FVGYEFSEVKDAKVLVILSSKNEVIDSAKEGEKITIILDKTPFYGESGGQVGDTGSFIIPSITPVLDTKIQKKNDRSCDRITEGIAIVENTNKVNDLYLHRCIVKSGSICKDDIVTASTDKERRQNLRRNHSATHLLHFALRKILGDHVTQKGSLIAPDRLRFDFSHNTQVTRDQLSLIEDMVNSLIRENLSAFTKIQSMNQAIGEGAMALFGKKYGDQVRVVNIGDSKELCGGTHVERTGEIGLFKIITECSIASGVRRIEALTGQEAIDYARDNEINLRKIAELVKAPVNEITSRLSILNQERKESETKIKSLYKKLVSAENIKSIEINGMNFVSHSFTDIPANIVREFTLQQQKPKTVIAFTAMEKNKTVLIVKVSKDLVDKISTKELVSTVTGGVCGENAELTQTGCDSSDIFTAIYSYLTR |
1YFS Chain:A ((3-454)) | LSAHEIRELFLSFFEKKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPYKRATSCQKCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLKLPKEKLYVSVYKDDEEAYRIWNEHIGIPSERIWRLGEEDNFWQMGDVGPCGPSSEIYVDRGE-EYEGDERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLERIASVLQGKNSNFEIDIIFPLIQFGEEVSGKKYGEKFETDVALRVIADHLRAITFAISDGVIPSNEGRGYVIRRILRRAMRFGYKLGIENPFLYKGVDLVVD-----IMKEPYPELELSREFVKGIVKGEEKRFIKTLKAGMEYIQEVIQKALEEGRKTLSGKEVFTAYDTYGFPVDLIDEIAREKGLGIDLEGFQCELEEQRERARKH----------PVYSHL-KELGKTSAFVGAAAL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238293 for 3644 contacts (-65.4/contact) +
2D Compatibility (PS) -46858 + (NN) -16552 + (LL) 29352
1D Compatibility (HY) -47200 + (ID) 10850
Total energy: -330401.0 ( -90.67 by residue)
QMean score : 0.533
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