Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLVVTLPFMIFFNNEVGNYKVQFSYGCVYYATNEYVHAGDKFYSNYFIDSHYGREINMYPQSELLAKGYVGNTLPILISLDKDLIK
2XLR Chain:A ((86-108))
-------------------------------------------FADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNT
General information:
TITO was launched using:
RESULT:
Template:
2XLR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8703 for 85 contacts (-102.4/contact) +
2D Compatibility (PS) -2317 + (NN) -494 + (LL) 3244
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -11120.0 ( -130.82 by residue)
QMean score : -0.130
(partial model without unconserved sides chains):
PDB file :
Tito_2XLR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XLR-query.scw
PDB file :
Tito_Scwrl_2XLR.pdb
: