Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNRKDLLSVLDFTVNDVGNIIELAGQYLENKAANGRI--LENKTVINLFFEDSTRTLTSFEMAAKSLGANVVTLPVKS-SSINKGEDLTDMIKTLNAMNPDYIVVRQKSSGIVNMLAKHVSCLLINAGDGSSEHPTQALADYFVISSHKKQIKNLKIVICGDILHSRVARSNIRLLKMFGAKICLVAPPTL-ICKHFPE---------VDSIYYSLIEGIKDADVIMLLRLQKERMNSGCFIPSNREYFYL---YGLDSQKLLCAKSNAIVMHPGPINRGIEISSDITDHII-LQQVEFGLAIRKAVLHYYRPC |
| 1ML4 Chain:A ((6-301)) | ----RDVISIRDFSKEDIETVLATAERLERELKEKGQLEYAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYC-DVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETT--TLEDVIGKLDVLYVTRIQKERF------PDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLPRVDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVLGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ML4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213181 for 2360 contacts (-90.3/contact) +
2D Compatibility (PS) -30200 + (NN) -9998 + (LL) 356
1D Compatibility (HY) -16800 + (ID) 5000
Total energy: -274823.0 ( -116.45 by residue)
QMean score : 0.583
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