Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLELKNKISAEAPKTDPSLAGVAANAILDVLGAVPSKPLRVQAELYKKESNNEEMDHTRDSGINNQSSGIKKSASEGTLFSESWDSKKTSGDWKRLLDNKPGDGSDTPPTPFTPKDDSYIENSETDSTTPLISSGKKTNRVWPRVKYAMQQKGVIIFGANTIILCTSLALVYLQDKAKFIVFFANSPFYITILVIASASLFAVSPIFHIIKQFRDAEEYQIQKGNANEILDKVLECQPRDKVIKSVRLEYSNDTHSNFALNAWEAKDNFIN----IGEKVISRANKIESIINNRPLFIALLTSVVAANIAFPLGLLAIDGINNVQKFYQNPLTHNVGLSLFIGSGILALSIICLGVHYYRKTNCTNLIYSQEKINTESVNKKFIKKIEQERTNVLKDNHGKDAKCISLTLEQVVVQSHNCKDIVYSIGE |
4PV1 Chain:B ((64-145)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPADPFATPLEILPEWYLYPVFQILRSVPNKLLGVLLMASV-------PLGLILVPFIENVNKF-QNPFRRPVATTIFLFG---TLVTIWLGIGATFPLDKTLTLGLF---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23335 for 380 contacts (-61.4/contact) +
2D Compatibility (PS) -7831 + (NN) -295 + (LL) 20932
1D Compatibility (HY) -9200 + (ID) 1400
Total energy: -21129.0 ( -55.60 by residue)
QMean score : 0.153
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