Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDNIVPISIVKELEDSYLSYAMSVIISRAIPDVRDGFKPVHRRILYAMSKAGYDAGKPYKKAARIVGDVMGKYHPHGDAAIYDSLVRMAQDFSLLLPLIDGQGNFGSVDGDPPASMRYTEARLQGVSHFLLNDIDENTVDFRPNYDGNESEPVVLPAEFPNLLVNGASGVAVGMATNIPPHNLGEIIDACVLYIDNHEVTLDELLKVVPGPDFPTGGTILGRSGIRSAFATGRGSIVIQGKTHIEDLPQDRQAIVIDEIPYQVNKVKLIEKIGELVKEEKINGITEIRDESDKSGIRVVIDLRKNAAADFILNQILGLTPLRSSFSVNTLVLNNNRPVLMSLKEIIVAFVDFRKEVLIRRTEFRLRKTREKAHIYIGLYIAVLSIDEVIKIVRGTKDPEEANKKLLNKEWKTSAEINTIIGLISDSMSFLKDGVYRLTELQTKAILDIKLQRLTGLERDKLEAELNSMVNLVKEYIAFLGSEEKLMKEIKNNLQEVRNRFAVPRKTVIEESDADIEVEDLIPQEDMVVTVTMNGYIKRVKLSHYRTQRRGGKGKLGQGLKEEDVITKLFVGNTHTSLLFFSNIGRVYRLKVYKLPLAEPTARGRALVNIFPLADGETITNIMPLPSESDESQNIVFATAHGNIRRNSLADFHYIPSNGKIAIKLDEGDKLVSVKVCNETDHVLLSTMLGKSIRFIVSDVRQFKSRNSDGVRGIKLAKNDSVISMTILNGIGVTTETKELYLKVPLAKRLETAVNNSIDSKLEKVLNDLGIDNKLFLKLAANEEFILTITENGFGKRTSAYEYRVTNRGGIGITNILTTNRNGNVVASFPVEQDDNIMLITDKGKLIRISVNGIRIAGRSTQGVTLFKTESREKVVSAAKIEDPGSTEENMPEIGDSASS |
3FOE Chain:A ((5-479)) | -----QNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSN--DKSYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLLVN----------TDIPPHNLAEVIDAAVYMIDHPT-KIDKLMEFLPGPDFPT--IIQGRDEIKKAYETG-GRVVVRSKTEIEKLKGGKEQIVITEI----NKANLVKKIDDVRVNNKV------------------IEL-----TELVLNYLFKYTDLQINYNFNMVAIDNFTPRQVGIVPILSSYIAHRREVILARSRFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENL-----KVS---------------------YDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDERTMYNLMKKELREVKKKFATPRL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -206635 for 3205 contacts (-64.5/contact) +
2D Compatibility (PS) -45621 + (NN) -14289 + (LL) 28856
1D Compatibility (HY) -39200 + (ID) 9100
Total energy: -285989.0 ( -89.23 by residue)
QMean score : 0.434
|
|
|