Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSFFVFLIFFSVSALASVSDVQLKEKYRDWLVYTALEDGEKVCYIVSYPKKKSEHYTTNRKPYVMVSYVDKKADEVSVTSGFQYDKEPIVLNIDKKIKYALYIIQGDLAWTEHTKTDRDLILKMKQGLSMVVSGRIKATTIDDTYSLLGFQKAYQKMHDLCYVK |
| 3NB3 Chain:A ((3-11)) | --------------------------KDNTWYTGAKLGWSQHENKLGAGAFGGYQVNPYVGFEMGYDWLGRMPYAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTYSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNGMLSLGVSYRFG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 49 for 16 contacts (3.1/contact) +
2D Compatibility (PS) -936 + (NN) 109 + (LL) 3176
1D Compatibility (HY) 400 + (ID) 100
Total energy: 2698.0 ( 168.62 by residue)
QMean score : 0.041
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