Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNTIIRKYDIRGVVGKDLQINDGYEIGRKFG-QTVAN----VCVGYDSRIDSPSIEKELIRGLTLSGANVIRIGLCSSPMLYAATQITQADLGIIITASHNPSDYNGFKFFSSEKVYLDQETKEIISSSIKN--STKIGSLINVNIYSQYIRVLKSAVKNNSTQKLKIAWDCGNSPASGIL-RYIETILPGHTHIIINNSIDGVFPLHNPDPIEEKNLVQLIDIVKQDKCDLGIALDGDSDRVRLIDNKGSIVSNDHLFMIFVREVLEECPRSKVIANVKMSMKVHDFVSKLGGQVVTCATGHSLVKKKMVEEGAKFAGELSGHFFFSE--LGFDDGLYSAIKAIDILLKQSQGLSQMIEDLPKLYITHEVKIVVKDEKKFQIIELIKKTLEQQNIAFSDLDGIKVTGNDNKGWWLLRVSNTQNCITARCEGDTLEDFELTKKVLFRYIDKAKSLDCNLS |
| 2H5A Chain:X ((9-460)) | LPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVAGETLANEQIQALRERIEKNDLASGVGSVEQVDILPRYFKQIRDDIA--MAKPMKVVVDCGNGVAGVIAPQLIEAL--GCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGNITTLDGVRV--DYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTV-FR--NQLKAVDSSLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205470 for 4088 contacts (-50.3/contact) +
2D Compatibility (PS) -47682 + (NN) -18960 + (LL) 228
1D Compatibility (HY) -35200 + (ID) 8550
Total energy: -315634.0 ( -77.21 by residue)
QMean score : 0.499
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