Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MIQLLTKFFNLSSSKVELGIE------VDHATVPWKGWLNGGQINLLLDMVD-HQLGVLLGLEVGSY
3A1G Chain:A ((685-757))
DEQMYQRCCNLFEKFFPSSSYRRPVGISSMVEAMVSRARIDARIDFESGRIKKEEFTEIMKICSTIEELRRQK-
General information:
TITO was launched using:
RESULT:
Template:
3A1G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 397 for 221 contacts (1.8/contact) +
2D Compatibility (PS) -5649 + (NN) -2804 + (LL) 104
1D Compatibility (HY) 5600 + (ID) 100
Total energy: -2452.0 ( -11.10 by residue)
QMean score : -0.216
(partial model without unconserved sides chains):
PDB file :
Tito_3A1G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A1G-query.scw
PDB file :
Tito_Scwrl_3A1G.pdb
: