Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKFVRLLSSILVALSVIFLGYCYFTKKGIFAPAVIHNAEVKIGGDFSLINQDGQVIRSNDFKDKYMMIFFGFSSCKKICPMNLGIISETLAKLDEKTSDKLQTFFITVDPECDSTEKLKEFQQQFDY---RIQMLTG-ERKKIDE-VIANYKVYTSKVGGEEGINHSSIIYLIGPGGKYVTHFAADLNSDESQSDKIAAEIKKYINEL
1XZO Chain:A ((16-152))
----------------------------------------------FTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENID-VRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTLK---
General information:
TITO was launched using:
RESULT:
Template:
1XZO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78596 for 945 contacts (-83.2/contact) +
2D Compatibility (PS) -14997 + (NN) -10461 + (LL) 4380
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -110874.0 ( -117.33 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_1XZO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZO-query.scw
PDB file :
Tito_Scwrl_1XZO.pdb
: