Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKESSKTKLSEDYTPSEDEEYMSVR--------QLEYFNLKLESILAELEKQELEDSAYYFDE-DSGNEKLIKRRKDR----KEKIKEALEKIKLGTYGYCDRTGEE------IGIARLKANPLA-VYCIEEQERLEKEKNVYKTDD
4DGL Chain:A ((26-137))
-----------------DEDYIQDKFNLTGLNEQVPHYRQALDMILDL--------NPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTD
General information:
TITO was launched using:
RESULT:
Template:
4DGL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15989 for 381 contacts (42.0/contact) +
2D Compatibility (PS) -8720 + (NN) -3110 + (LL) 1528
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -1563.0 ( -4.10 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_4DGL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DGL-query.scw
PDB file :
Tito_Scwrl_4DGL.pdb
: