Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKSFILSTGSYLPKKKLGNDEIALMVETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDGNV-DVLCTKGGISSTGDSGKIYMNGREVFKHAVDKLTASIEETLRCNNLKITDIDWLVPHQANIRIIEAVVKKLNFLMEKVINTVDQHANTSAASIPLALDYAIQKPKIKPGSLGILVAIGAGLTWGSVLLRY
4YLT Chain:A ((5-316))-----ILGTGSYLPVQVRSNADLEKMVDTSDEWIVTRTGIRERRIAGLDETVATMGFQAAEKALEMAGIDKDDIGLIIVATTSSSHAFPSSACQVQRMLGIKDAASFDLAAACAGFTYALSVADQYVKSG-AVKHAIVIGSDVLSRALDPEDRGTIILFGDGAGAVVLGASEQP---------GIMSTHLHADGRYGELLALPYP------PAYVTMAGNEVFKVAVTELAHIVDETLQVNNLDRTALDWLVPHQANLRIISATAKKLGMGMDKVVITLDRHGNTSAASVPSAFDEAVRDGRIQRGQLVLLEAFGGGFTWGSALVRF


General information:
TITO was launched using:
RESULT:

Template: 4YLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -292614 for 2960 contacts (-98.9/contact) +
2D Compatibility (PS) -31831 + (NN) -8076 + (LL) 604
1D Compatibility (HY) -25600 + (ID) 7500
Total energy: -365017.0 ( -123.32 by residue)
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_4YLT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YLT-query.scw
PDB file : Tito_Scwrl_4YLT.pdb: