Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGAVQIKKTGGPEVLEFIDKSIGEPKGEEVLIRHTAIGLNRYDLEHRKG-VRKIKGLPSVLGVEAVGVIEKLGKKIDDSLQIGDRVGYCTAPPGAYCEKRVIHQKYLVKIPDEIPDEVVAAVLFKGMTAHYLINQSYKIKPGAFVLVHGANGGLGQIICQWAKDKKGVVIGSVSSDKKMEVALQNGCTYAINYNDKNFVSKIMEITQNRGVGAVYDPIGYSTSRLSFESLSKFGIYVSYGQISGIAPVSFSLLSSRSLFATGTSIYHYKRDR---------FALVLTAMEIFEMVKKKLLTVRINKKYKFDEIIKAHHDMENRKVSGLNIIKVF |
| 2OBY Chain:A ((9-327)) | ---AVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGD-TAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGG-GDINGPLF-SKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -176069 for 2629 contacts (-67.0/contact) +
2D Compatibility (PS) -33558 + (NN) -13293 + (LL) 504
1D Compatibility (HY) -11200 + (ID) 4400
Total energy: -238016.0 ( -90.53 by residue)
QMean score : 0.459
|
|
|