Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSPEFAINALNSLLKSKNEVVAVYTKAPKPSGRGQKLTKSPVHIIAEESGIEV-------CTPTSLKPLVEQEKFKKFKPDVAVVAAYGLILPKEILNILKYSCINIHPSLLPRWRGAAPIQHTILAGDRKTGISIMQLDGGLDSGPILKQKKFLVEKNDNYKTLHDK-LSKLGSNLLMEVIDEIE--KHPPLEQSDDGACYA--DKIEDYKIYASDICEVAYRKVKA--FYPKAFVKIEHKRVRILDAD-FEVDASLTSGQGKIINDNMHISLKSGTLIPKIVQMEGRNSCNIKDFVRGLKFSMVKKFIE |
| 4R8V Chain:A ((6-260)) | IGQSLFGQEVYKELKNEGHMIVGVFT-IPDKDGK-----VDPLAIEAEKDGVPVFKFPRWRLKGKAITEVVDQ--YKAVGAELNVLPFCSQFIPMEVIDHPKHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFTVFWADDGLDTGPILLQRECDVEPNDNVNSIYKRFLFPEGVKGMVEAVRLIATGKAPRIKQPEEGATYECIQKKENSKIDWNQPAEAIHNWIRGNDRVPGAWAEIDGKSVSFYGSTLLENDHFSSNGQPLEIPGASRAALVTKNGLVLFGNDGKMLLVKNLQFEDGKMIPGSQYFK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111403 for 1749 contacts (-63.7/contact) +
2D Compatibility (PS) -26110 + (NN) -10477 + (LL) 300
1D Compatibility (HY) -13200 + (ID) 3800
Total energy: -164690.0 ( -94.16 by residue)
QMean score : 0.431
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