Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASAIRFLSIDAVQKASSGHPGMPLGMADVATVLFAQYLNHNPDDP-KWVNRDRFVLSNGHGSMLLYSILYLTGY-ISIDELKNFRQLTSKTPGHPEFGLTPGVEATTGPLGQGFAVAVGMALAESILKNQFG------INHYTYVMLGDGCLMEGISHEAASLAGHLKLNKLIALFDDNDISIDGATHLSCSDDAEKRFSAYGWNVNKI-DGHDFNSISLAIEQAR-KSDKPTLICCKTIIGKFSNRAGASSAHSGAFTEEDVKQMREKLNWNYVPFHVPKDVKNAWMETVE----RAKQNYNSVSFQRQALEPSENKELQRRLDKRLPDNIDDDLANLKKQIHETMPNEATRSSFGKVMELLTESMPELIGGSADLTGSNCTKYKHMKVIDNNNYSGSYVHYGVREHAMAACMNGMALHGGILPYGGTFLVFSDYCRPAIRLSALMKQQVIYVMTHDSIGVGEDGPTHQPIEHLASLRTVPNLYVFRPTDAIETLECISIALKKKESPALFALSRQNLGYMRKFHFNVDQSTNLSKSGAYVVCEYSEKLEVTIFATGSEVEIAIETRKKLQEKGIGTRVVSMPCWRLFDEQSDEYKDAILNNDSIK-VAIEAGSEIGWHKYIGSNGIFIGMKSFGESAPYKTLYEHFNINTDYVVKCVCEKLFISKP |
4C7X Chain:A ((31-680)) | ----LRTLSIDAIQRANSGHPGLPMGAAPMAYVLWTRHLKINPKTHMNWVNRDRFVLSAGHGSALLYSLAHLAGYDVSMDDLKNFREWKSNTPGHPEYGCTDGVEATTGPLGQGISMAVGMAMAEAHLGKKFNREGYPVMDHYTYALIGDGDLMEGVASEAASLAGHLKLGKLIALYDSNGISLDGKTSASFTENVGARFEAYGWQYILVEDGFNLEEIDKAIVQAKAESDKPTIIEIKTTIGYGSENQGTHKVHGSPLGEEGVAHAKEVYNWNYPPFTVPEEVSQRFKECLQDKGVKAENKWNEM-FEAYKKEYSD---LAQKFSDGFSNKVPNTLGDILPQYGED-DSIATRAASQKAINALAKEVSSLWGGAADLASSNKTVIAGEGDFQPESYEGRNIWFGVREFGMACAMNGIMLHGGTRIFGSTFFVFSDYLKAAIRLSAIQKLPVIYVLTHDSVAVGKDGPTHEPIEQLASLRTIPNVQVFRPADGNETSAAWKVALETLDKPTILVLSRQNLDTLP---ISKEKVFDGVEKGGYVVQGAENEADGILIATGSEVGLALKAKEELQKKGKDVIVVSLPSWERFEAQSEEYKNTVIPPELKKRMTIEAGTTYGWAKYAGDHGVMIGIDEFGMSAPSDIVLRELGMSVENIVDKYLE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C7X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -373454 for 6017 contacts (-62.1/contact) +
2D Compatibility (PS) -70100 + (NN) -41346 + (LL) 1448
1D Compatibility (HY) -49600 + (ID) 14800
Total energy: -547852.0 ( -91.05 by residue)
QMean score : 0.515
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