Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRTFQPKNLIRKRRHGFRSRMATRAGRKILNRRRSLGCKKLCA
2CIW Chain:A ((40-49))
--------------NHGYIPH----DGRAISRETLQNAFLNHMG
General information:
TITO was launched using:
RESULT:
Template:
2CIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1352 for 25 contacts (54.1/contact) +
2D Compatibility (PS) -1063 + (NN) -156 + (LL) 1668
1D Compatibility (HY) 400 + (ID) 0
Total energy: 2201.0 ( 88.04 by residue)
QMean score : -0.218
(partial model without unconserved sides chains):
PDB file :
Tito_2CIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CIW-query.scw
PDB file :
Tito_Scwrl_2CIW.pdb
: