Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKAGKATKRNKIKRRLRVLARTNILDISNIGY-YYIILTHKNIMQASYKNLRKDITICLKKIK
1MWR Chain:A ((128-176))
----------------------------------------------------------------------ERGKILDRNNV-ELANTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIK
General information:
TITO was launched using:
RESULT:
Template:
1MWR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11389 for 192 contacts (-59.3/contact) +
2D Compatibility (PS) -4947 + (NN) -437 + (LL) 5944
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -13629.0 ( -70.98 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_1MWR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MWR-query.scw
PDB file :
Tito_Scwrl_1MWR.pdb
: