Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKIATWNVNSIRKRVDQL-CSFIVDDQIDIILLQEIKCTEEQFPYVEIEKLG-----YECIVYGEVARNGVCVLSKH-PILEKFKIDIVEGYQEARYIECLIKHNNQKMRVVSIYVPNGQSLGSHVFEYKLKFLDNLYERMDNLLKNEELIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREKLKAILN-LGFKDAFRMSHPNLQ-QFSWWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYIDDRLRKLENPSDHTPIVSIMEW |
1DE8 Chain:B ((19-271)) | TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLP-AELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGR----VIVAEFDSFVLVTAYVPNA-GRGLVRLEYRQRW-DEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPAL----CDSKIRSKALGSDHCPITLYLAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98550 for 2002 contacts (-49.2/contact) +
2D Compatibility (PS) -25850 + (NN) -10832 + (LL) 1024
1D Compatibility (HY) -12400 + (ID) 3850
Total energy: -150458.0 ( -75.15 by residue)
QMean score : 0.438
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