Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSELAKSTREDIEAKIKKIVLEHIS-KDVEKFNNSSKLSEHGADSLDAVEIIMAAEEEFGIEIPDEDAQKMETMEQIVEYVSNKKNNS
2FAC Chain:A ((3-76))
------------IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA--
General information:
TITO was launched using:
RESULT:
Template:
2FAC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10288 for 482 contacts (-21.3/contact) +
2D Compatibility (PS) -8101 + (NN) -4671 + (LL) 580
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -29380.0 ( -60.95 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2FAC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FAC-query.scw
PDB file :
Tito_Scwrl_2FAC.pdb
: