Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPATPDNSTAVAII---PIAAILGIIPIATSVAPIAPNN-NAKPIVHPPEKVLEGCCFCEEIMLVYYKTVARCFVFCANYYYFHHLQTFFEMELYYL
1Z0S Chain:A ((178-226))
--VATQIGSTGYAFSAGGPVVEPY---LECFILIPIAPFRFGWKPYVVSMERKIEVIAEKAIVVADGQKSVDFDGEITIEKSEFPAVFFKNEKRFRNL
General information:
TITO was launched using:
RESULT:
Template:
1Z0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 966 for 242 contacts (4.0/contact) +
2D Compatibility (PS) -4664 + (NN) -292 + (LL) 620
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -6070.0 ( -25.08 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_1Z0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z0S-query.scw
PDB file :
Tito_Scwrl_1Z0S.pdb
: