Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MFSNLYRGLLKTSSRFSDGVKSIFSAKKKLDQSLLDELEELLISMDIGHKTSKLIIDRLASIKFDKEVEHNIITQQLMSEIEAILNPVVQPLILDKNPHIIMVCGVNGNGKTTTIGKLAYKYKNMGKSVMLVACDTFRAAASEQLNIWAERSDCFIVTGEYGNDSASVAYRAVSQAIKGSVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEAFSKMVSVTGLIITKLDGTAKGGVVIGLAETYRVKLHAIGIGESIEDLREFTSKEFAKALFGCD 1VMA Chain:A ((15-304)) LFDFLKKGLQKTKETFFGRVVKLLKGKK-LDDETREELEELLIQADVGVETTEYILERLEEKDGDA-------LESLKEIILEILNFDTKLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIILTKLDGTAKGGITLAIARELGIPIKFIGVGEKAEDLRPFDPEAFVEVLLSE-

General information: TITO was launched using: RESULT: Template: 1VMA.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -213815 for 2573 contacts (-83.1/contact) + 2D Compatibility (PS) -31695 + (NN) -15862 + (LL) 664 1D Compatibility (HY) -20800 + (ID) 6800 Total energy: -288308.0 ( -112.05 by residue) QMean score : 0.577

(partial model without unconserved sides chains): PDB file : Tito_1VMA.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1VMA-query.scw PDB file : Tito_Scwrl_1VMA.pdb: