Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLSQEANSNSVEAQKLQQVDNITPSSEGLLQQMQSLEKRIKSLEVTNRVILGLFIGTLATAMTVGAGFAIAAAPIIAGSIVGGVLATVALVALGATVYRCRAQVEAGFRYAAEKTIKGVKYIGEKIKDSAIHTKDSVKEAVSSIGQVAREETSSVLKTMGHKLSGLGASMSNLDSIPYSIGLQ-DSMVVSKTEEKTKNFNSIKE-MFVKEVFEDKAIDSSVLVKKIFSELKGKVLEKAYSVDGQQGFKKDQLINQLGQQADFVSKLSSKKLQNLLAQGDNNLYEIFSEHHDEIKRIVKEHKTEHNFSESLNRMAKRHDENRKDSTQSSLPRSNSLSSVRTDSTVNSVAELLNSEGHRKVRSSSKLLRWLPWNKVSKAPEEAANVKYQVLPESDILAREIGKRTFYGIPVPAEGVDKTVTVNPNLFRSNSPNSLYGSPVLTPAVLLQVPKSLSLGSLSSDSGMDSGPSTLEKQSLSPEDLAKARASLKNTGSLGKLVEQQPSASPPAVEDVSEDLEEDFKKDKPATTFSQLKAEKSGAEVSYL |
| 2JQE Chain:A ((328-385)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------MNKMGPVRKIFEMLPFGLGLKVDNDVMEMTQEKMKKFRVIMDSMTEEELLNPKIIDSS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5052 for 185 contacts (27.3/contact) +
2D Compatibility (PS) -5691 + (NN) -356 + (LL) 30944
1D Compatibility (HY) -4400 + (ID) 950
Total energy: 24599.0 ( 132.97 by residue)
QMean score : 0.303
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