Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIRIGTRGSSLAIAQALEAKQKLLDLFSSLSVEIIKIKTSGDKYANANLAEIGGKGLFIKEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKY---KSLKSLPQQAIIATSSIRRKVQLLNFRPDLNIVPLRGNVTTRL----QNQSFDGIILAEAGLIRLKKDYLITEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCFTPLAALAKYVSENVLHLYCMLADKKNIYFTERTSFVEDAEKMGMDAGLELKSKCL |
3EQ1 Chain:A ((20-266)) | -VIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIA---------------------FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPQHEDDPQLVGITARN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105077 for 1657 contacts (-63.4/contact) +
2D Compatibility (PS) -23952 + (NN) -13769 + (LL) 888
1D Compatibility (HY) -18000 + (ID) 4150
Total energy: -164060.0 ( -99.01 by residue)
QMean score : 0.428
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