Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MYKLLISIKEVKIIAIVKNMGVAYVFSKIQPKATIIATITLVFVALALYLVPGLGLIFALFATIPGIVLWNKSIQSFGVSALITVIITTVLGNTFVLSAIILVLIASLIIGQLLKERTSKERMLYVTTVAMSLISLIAFMLLQTFGRIPPSASIVKPFKQTLHEAITMSGADANMTQILEEGFRQATVQLPGFIIIITFLIVLINLIVTFPVLRKFKIATPVFKPLFAWQMSGILLWIYIIVIICLLFTGQPSVFQSILLNFQLVLS--LVMYIQGLSVIHFFGKAKGLPNAVTILLLIIGTIL--TPTTHIVGLLGVIDLSLNLKRIMKNNSKK |
| 4U9O Chain:A ((14-332)) | PIAGTPSQVISDGKAIKKVALLGEEYVGMRPTMHVRVGDEVKKAQILFEDKKNPGVKFTSPVSGKVVEINRGAKRV-------LQSVVIEVAGDDQVTFDKFEANQLASL------NRDAIKTQLVES--------GLWTAFRTRPFSKVPAIDS---TSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDVLSALTTGKVYVCKKGTSLPRSQQPNVEEHVFDGPHPDHVAWSINYQDVIAVGQLFLTGELYTQRVVSLAGPVVNKPRLVRTVMGASLEQLVDS-EIMPGEVRIIS---GSVLSGTKATGPHAYLGRYHLQVSVLR------EG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -397805 for 2538 contacts (-156.7/contact) +
2D Compatibility (PS) -30375 + (NN) 13675 + (LL) 3544
1D Compatibility (HY) -400 + (ID) 2600
Total energy: -413961.0 ( -163.11 by residue)
QMean score : 0.066
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