Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDNEKRVLREIYNHHNISRTQISKNLEINKATISSILNKLKYKSLVNEVGEGDSTKSGGRKPILLKVNHLYGYFISLDLTYSSVEVMYNYFDGNVIKHESYD---LPDEK--VSSILSIIKKHIDI--QEKLDTYNGLLGVSVSIHGVVDNEQHVTYLPFH--ETEGISIAKKIKEITNVPVVVENEANLSALYERNFNHNLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKVSDNVEIFHK--IEDIFSQEALLHNLSNQLNEKMTL-SKLIQFYNEKNPVVVEEMEQFINK---------------IAVLIHNLNTQFNPNAIYINCPLFNEMPEILEAIKNQFKQYS----RNEIQIKLTSNVKFATLLGGTLAIIQKVLQINDIYLDIKA |
| 2QM1 Chain:A ((9-321)) | ---------------------------------------------------------------------------IGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKED----FVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVSSATGVVR-VARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170268 for 2331 contacts (-73.0/contact) +
2D Compatibility (PS) -29939 + (NN) -12048 + (LL) 5512
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -222593.0 ( -95.49 by residue)
QMean score : 0.451
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