Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIYMNTIKNTIYTEAIFSKDEKHRYLLKKTWDEKKPACTVITMYPHLDGVLSLDLTTVL-----ILNQLANSERYGAVYLVNLFSNIKTPENLKHIKEPYDKHTDIHLMKAISESDTVILAYGAYAKRPVVVERVEQVMEMLKPHKKKVKKLINPATNEIMHPLNPKARQKWTLKA
3A6H Chain:A ((83-166))
----------------------------------------------HFPGTTSLDGATLTGTVQDIIRELA---RHGARRLVLMNGHY---ENSMFIVEGIDLALRELRYAGIQDFKVVVLSYADFVKDPAVIQQL-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18959 for 413 contacts (-45.9/contact) +
2D Compatibility (PS) -8398 + (NN) -2465 + (LL) 7288
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -27834.0 ( -67.39 by residue)
QMean score : 0.086
(partial model without unconserved sides chains):
PDB file :
Tito_3A6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A6H-query.scw
PDB file :
Tito_Scwrl_3A6H.pdb
: