Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIMFVLCGFIFPLTVTALGQV-----LFPEQANGSLVKQDGKVIGSKLIGQQWTEPKYFHGRISAVNYNMNANEVKESGGPASGGSNYGNSNPELKKRVQETIKQEGKKISSDAVTASGSGLDPDITV |
1HP1 Chain:A ((413-465)) | --------------LTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTY--RMATLNFN----------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -550 for 217 contacts (-2.5/contact) +
2D Compatibility (PS) -4973 + (NN) 772 + (LL) 2792
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -6409.0 ( -29.53 by residue)
QMean score : 0.207
|
|
|