Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLMEKILYQTDEFKLKPSGWYKTIPPKKDGGTEFEIMLSGPIAFTDRFIDPATRKEKVFLSDLNNIELVEKASILTALQLPSLIEYGFTINEKHIRDLGFVLQQMRSTTPLSTIYSGVGMLHTLLGPLISLDQPYFSNEITNSTSIICDNKYDLIPKGNLSEWLQMYKEEVHGNLSLELDVLFGVS-SLVTAFLKYHNNVEFSGTIFSFTGQSSTGKSTAAMLAASVAGNPTKGTENLFRSWNATRNALEGYLSGNYGVPIVLDELSAATFHDTTGLLYSFAEGQGRQRANINGDVKTPKN |
1U0L Chain:A ((117-233)) | -----------------------------------------------------------------------------------------------------------------------------------------------ETVMVINKMDLYDEDDLRKVRELEEIYSGLYPIVKTSAKTGMGIEELKEY--------LKGKISTMAGLSGVGKSSLLNAINPGLKLR------------TTTTAQLLKFD---FGGYVVDTPGFAN------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29695 for 646 contacts (-46.0/contact) +
2D Compatibility (PS) -11055 + (NN) -4354 + (LL) 11240
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -35964.0 ( -55.67 by residue)
QMean score : 0.171
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