Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLKWVSSYNNERDAWFVLYPPSKASSCFTLIVDVALFSE
1JID Chain:A ((11-21))
------------DQDRFICIYPA------------------
General information:
TITO was launched using:
RESULT:
Template:
1JID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15 for 23 contacts (-0.7/contact) +
2D Compatibility (PS) -1370 + (NN) -2342 + (LL) 2416
1D Compatibility (HY) -2000 + (ID) 150
Total energy: -3461.0 ( -150.48 by residue)
QMean score : 0.106
(partial model without unconserved sides chains):
PDB file :
Tito_1JID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JID-query.scw
PDB file :
Tito_Scwrl_1JID.pdb
: